SNP Detail For snp_sb002002573550    [See in GBrowse]
1.General Information
SNP ID: snp_sb002002573550
Organism: Sorghum
Individual: BTx642
Create time: 2015-01-01
Last update: 2015-01-01
2.Allele Information
Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: C
5'flank: TAAAATGACTGGTTTAATATATGAATCTTG
3'flank: TGTGATGTTTAAAGGTGATTTGTAGACAAT
3.Reference Map information
Chrom Position Reference BTx642
Chr10 1079 T C
4.Gene information
Gene model(s)
Gene ID Position in Gene Strands Gene Allele Location
NA NA NA NA NA
Transcript Protein
SNP to transcript Accession Position in Transcript Allele change Accession Position in Protein Residue change
NA NA NA NA NA NA NA
5.SNPs of other individuals in this position
SNP_ID Individual Genotype 5' Near Seq 30 bp 3' Near Seq 30 bp Create time Last update time
snp_sb012013907765 LR9198 C TAAAATGACTGGTTTAATATATGAATCTTG TGTGATGTTTAAAGGTGATTTGTAGACAAT 2015-01-01 2015-01-01
snp_sb025028197804 SC23 C TAAAATGACTGGTTTAATATATGAATCTTG TGTGATGTTTAAAGGTGATTTGTAGACAAT 2015-01-01 2015-01-01
snp_sb019021431889 Rio C TAAAATGACTGGTTTAATATATGAATCTTG TGTGATGTTTAAAGGTGATTTGTAGACAAT 2015-01-01 2015-01-01
snp_sb035043097439 PI585749 C TAAAATGACTGGTTTAATATATGAATCTTG TGTGATGTTTAAAGGTGATTTGTAGACAAT 2015-01-01 2015-01-01
6.Fasta Information
ACAGAACCTG GAACTTTGTT TAAAATGACT GGTTTAATAT ATGAATCTTG
C
TGTGATGTTT AAAGGTGATT TGTAGACAAT TTCATAAGCT TTCCAGAATG