SNP Detail For snp_sb017019080427    [See in GBrowse]
1.General Information
SNP ID: snp_sb017019080427
Organism: Sorghum
Individual: QL12
Create time: 2015-01-01
Last update: 2015-01-01
2.Allele Information
Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: Y
5'flank: ACTTTTATGTGTCCAAACTATAGTAAAATT
3'flank: CATGTGTTCAAGGTATGGTAATATTTTTTG
3.Reference Map information
Chrom Position Reference QL12
Chr9 10076 C Y
4.Gene information
Gene model(s)
Gene ID Position in Gene Strands Gene Allele Location
Sobic.009G000100 269 - Y 3' UTR Variant
Transcript Protein
SNP to transcript Accession Position in Transcript Allele change Accession Position in Protein Residue change
NA NA NA NA NA NA NA
5.SNPs of other individuals in this position
SNP_ID Individual Genotype 5' Near Seq 30 bp 3' Near Seq 30 bp Create time Last update time
snp_sb009010319869 IS9710 Y ACTTTTATGTGTCCAAACTATAGTAAAATT CATGTGTTCAAGGTATGGTAATATTTTTTG 2015-01-01 2015-01-01
snp_sb016017826098 PI525695 Y ACTTTTATGTGTCCAAACTATAGTAAAATT CATGTGTTCAAGGTATGGTAATATTTTTTG 2015-01-01 2015-01-01
snp_sb031035326095 PI586430 Y ACTTTTATGTGTCCAAACTATAGTAAAATT CATGTGTTCAAGGTATGGTAATATTTTTTG 2015-01-01 2015-01-01
snp_sb035042971944 PI585749 T ACTTTTATGTGTCCAAACTATAGTAAAATT CATGTGTTCAAGGTATGGTAATATTTTTTG 2015-01-01 2015-01-01
snp_sb007008254757 IS3614-2 T ACTTTTATGTGTCCAAACTATAGTAAAATT CATGTGTTCAAGGTATGGTAATATTTTTTG 2015-01-01 2015-01-01
6.Fasta Information
AAAATTCTAG ACTTTTCCAT ACTTTTATGT GTCCAAACTA TAGTAAAATT
Y
CATGTGTTCA AGGTATGGTA ATATTTTTTG TGAAAGCTTG AGGAGGTAAT